Genopathy
Gene-Disorder Association · Article
Gene
PAX1
Paired Box 1
Disorder
Otofaciocervical Syndrome 2, With T-Cell Deficiency
First reported 2013
Supporting publications 4
Key publication · gene–disorder A hypofunctional PAX1 mutation causes autosomal recessively inherited otofaciocervical syndrome.Human genetics · 2013
Key publication · disorder A locus in 2p13-p14 (OFC2), in addition to that mapped in 6p23, is involved in nonsyndromic familial orofacial cleft malformation.Genomics · 1998
Manually curated
Association Review

In brief

The association between PAX1 (Paired Box 1) and Otofaciocervical Syndrome 2, With T-Cell Deficiency is well established and manually curated, with its 4 contributing sources — 3 of them expert-curated — recording a known molecular basis, likely-pathogenic variants, and causative variation.

Sources 4
Clinical variants 18
Symptoms 60
Compounds 0
Trials 0
Publications 4
01
At a glance

Association overview

A cited synthesis of the gene–disorder association, with a clinical-actionability summary where the evidence supports one.

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02
Provenance

Evidence and sources

4 sources

Every contributing database and publication behind this association, with evidence type, strength, accessions and deep links.

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03
PAX1

The gene

1 source summary

A gene summary alongside the source descriptions it was distilled from.

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04
Otofaciocervical Syndrome 2, With T-Cell Deficiency

The disorder

9 database identifiers

The disorder’s summary, prevalence, aliases and cross-reference identifiers (OMIM, Orphanet, MONDO, ICD-10, MedGen).

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05
Phenotype

Clinical features

21 clinical features

The disorder’s clinical features (HPO) grouped by body system, each with observed frequency and penetrance.

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06
ClinVar and variant evidence

Genetic basis

18 clinical variants

ClinVar variants reported for this pair, with disorder-specific significance, review status, molecular consequence and origin.

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07
Mechanism overlap

Shared mechanisms

Biological pathways and phenotype concepts shared by the gene and the disorder, with supporting publications.

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08
Literature

Reading

4 publications

Publications linking the gene and the disorder, with title, authors, journal, year and citation metrics.

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09
Provenance

References & sources

10 references

Every source and publication cited across this dossier, as one numbered reference list.

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