Genopathy
Gene-Disorder Association · Article
Gene
SCYL1
SCY1 Like Pseudokinase 1
Disorder
Spinocerebellar Ataxia, Autosomal Recessive 21
First reported 2018
Supporting publications 4
Key publication · gene–disorder SCYL1 variants cause a syndrome with low γ-glutamyl-transferase cholestasis, acute liver failure, and neurodegeneration (CALFAN).Genetics in medicine : official journal of the American College of Medical Genetics · 2018
Key publication · disorder Spinocerebellar ataxia type 1 and Machado-Joseph disease: incidence of CAG expansions among adult-onset ataxia patients from 311 families with dominant, recessive, or sporadic ataxia.American journal of human genetics · 1995
Manually curated
Association Review

In brief

The association between SCYL1 (SCY1 Like Pseudokinase 1) and Spinocerebellar Ataxia, Autosomal Recessive 21 is well established and manually curated, with its 4 contributing sources — 3 of them expert-curated — recording a known molecular basis, likely-pathogenic variants, and a causative germline mutation.

Sources 4
Clinical variants 27
Symptoms 82
Compounds 0
Trials 0
Publications 4
01
At a glance

Association overview

A cited synthesis of the gene–disorder association, with a clinical-actionability summary where the evidence supports one.

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02
Provenance

Evidence and sources

4 sources

Every contributing database and publication behind this association, with evidence type, strength, accessions and deep links.

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03
SCYL1

The gene

1 source summary

A gene summary alongside the source descriptions it was distilled from.

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04
Spinocerebellar Ataxia, Autosomal Recessive 21

The disorder

11 database identifiers

The disorder’s summary, prevalence, aliases and cross-reference identifiers (OMIM, Orphanet, MONDO, ICD-10, MedGen).

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05
Phenotype

Clinical features

37 clinical features

The disorder’s clinical features (HPO) grouped by body system, each with observed frequency and penetrance.

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06
ClinVar and variant evidence

Genetic basis

27 clinical variants

ClinVar variants reported for this pair, with disorder-specific significance, review status, molecular consequence and origin.

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07
Mechanism overlap

Shared mechanisms

Biological pathways and phenotype concepts shared by the gene and the disorder, with supporting publications.

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08
Literature

Reading

4 publications

Publications linking the gene and the disorder, with title, authors, journal, year and citation metrics.

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09
Provenance

References & sources

11 references

Every source and publication cited across this dossier, as one numbered reference list.

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